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X-WR-CALNAME:Bioinformatics Research Center
X-ORIGINAL-URL:https://brc.ncsu.edu
X-WR-CALDESC:Events for Bioinformatics Research Center
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TZID:UTC
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DTSTART:20250101T000000
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BEGIN:VEVENT
DTSTART;TZID=UTC:20260925T130000
DTEND;TZID=UTC:20260925T160000
DTSTAMP:20260902T131513Z
CREATED:20260902T125753Z
LAST-MODIFIED:20260902T131513Z
UID:1751-1790341200-1790352000@brc.ncsu.edu
SUMMARY:Day 0: Workshop Prep
DESCRIPTION:Day 0 is an optional preparation session designed to make sure participants have the command-line\, HPC access\, and software setup needed for the main workshop. \n\n\n\nWhat You’ll Learn\n\n\n\n\nCommand-line basics\, including navigating directories\, viewing files\, piping commands\, and editing files\n\n\n\nShell scripts and $PATH\n\n\n\nConfirming HPC account and allocation/queue access\n\n\n\nInstalling or testing Nextflow\n\n\n\nConfirming Docker or Singularity/Apptainer availability\n\n\n\nRunning a short environment sanity-check script\n\n\n\nRequesting an interactive HPC session using salloc\n\n\n\nLoading required modules such as Nextflow and Singularity/Docker\n\n\n\n\nNC State participants: We will help confirm your HPC account and allocation/queue access during Day 0. \n\n\n\nExternal participants: You should already have an active account and allocation on your institution’s SLURM-based HPC cluster and know how to request an interactive session on that system. \n\n\n\n    \n\n      \n                  Register Here\n			\n			\n		\n              \n    \n  \n\n\n      \n                  Prequisites & Audience
URL:https://brc.ncsu.edu/event-academicaffairs/day-0-workshop-prep/
ATTACH;FMTTYPE=image/png:https://brc.ncsu.edu/wp-content/uploads/sites/467/2026/08/prep_nextflow.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=UTC:20261002T130000
DTEND;TZID=UTC:20261002T170000
DTSTAMP:20260902T133148Z
CREATED:20260902T132724Z
LAST-MODIFIED:20260902T133148Z
UID:1759-1790946000-1790960400@brc.ncsu.edu
SUMMARY:Main Nextflow Workshop Day 1
DESCRIPTION:What You’ll Learn\n\n\n\nDuring this hands-on workshop\, you will learn how to: \n\n\n\n\nUnderstand why workflow managers are useful for reproducibility\, portability\, and scalability\n\n\n\nBuild your first Nextflow process and workflow\n\n\n\nUse channels to move data between processes\n\n\n\nConnect multiple processes into a bioinformatics pipeline\n\n\n\nConfigure pipelines using parameters and Nextflow configuration files\n\n\n\nOrganize processes into reusable modules\n\n\n\nIntegrate containers using Singularity/Apptainer or Docker\n\n\n\nConfigure Nextflow to run jobs through SLURM\n\n\n\nBuild and run a complete bioinformatics workflow on an HPC cluster\n\n\n\nBy the end of the workshop\, participants will have built\, containerized\, and run a complete four-step bioinformatics pipeline: FASTQC → trimming → FASTQC → alignment\n\n\n\n\n\n\n\n\n\n\n\n\n    \n\n      \n                  Register Here\n			\n			\n		\n              \n    \n  \n\n\n      \n                  Prerequisites & Audience
URL:https://brc.ncsu.edu/event-academicaffairs/main-nextflow-workshop/
ATTACH;FMTTYPE=image/png:https://brc.ncsu.edu/wp-content/uploads/sites/467/2026/08/Nextflow-Weekend-1-3.png
END:VEVENT
BEGIN:VEVENT
DTSTART;TZID=UTC:20261003T083000
DTEND;TZID=UTC:20261003T173000
DTSTAMP:20260902T133116Z
CREATED:20260902T133109Z
LAST-MODIFIED:20260902T133116Z
UID:1764-1791016200-1791048600@brc.ncsu.edu
SUMMARY:Main Nextflow Workshop Day 2
DESCRIPTION:What You’ll Learn\n\n\n\nDuring this hands-on workshop\, you will learn how to: \n\n\n\n\nUnderstand why workflow managers are useful for reproducibility\, portability\, and scalability\n\n\n\nBuild your first Nextflow process and workflow\n\n\n\nUse channels to move data between processes\n\n\n\nConnect multiple processes into a bioinformatics pipeline\n\n\n\nConfigure pipelines using parameters and Nextflow configuration files\n\n\n\nOrganize processes into reusable modules\n\n\n\nIntegrate containers using Singularity/Apptainer or Docker\n\n\n\nConfigure Nextflow to run jobs through SLURM\n\n\n\nBuild and run a complete bioinformatics workflow on an HPC cluster\n\n\n\nBy the end of the workshop\, participants will have built\, containerized\, and run a complete four-step bioinformatics pipeline: FASTQC → trimming → FASTQC → alignment\n\n\n\n\n\n\n\n\n\n\n\n\n    \n\n      \n                  Register Here\n			\n			\n		\n              \n    \n  \n\n\n      \n                  Prerequisites & Audience
URL:https://brc.ncsu.edu/event-academicaffairs/main-nextflow-workshop-day-2/
ATTACH;FMTTYPE=image/png:https://brc.ncsu.edu/wp-content/uploads/sites/467/2026/08/Nextflow-Weekend-1-3.png
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